Biochemical Networks

H. Wierenga, Statistical Mechanics of Cytoskeletal Filaments, VU University Amsterdam, 2021-05-17

G. Malaguti and P.R. ten Wolde, Theory for the optimal detection of time-varying signals in cellular sensing systems, eLife 10, e62574: 1-26 (2021)

M. Meijers, S. Ito and P.R. ten Wolde, Behavior of information flow near criticality, Phys. Rev. E 103, 1: L010102 : 1-5 (2021)

H. Wierenga and P.R. ten Wolde, Diffusible cross-linkers cause superexponential friction forces, Phys.Rev.Lett. 125, 7: 078101: 1-6 (2020)

Y. Li and P.R. ten Wolde, Shape Transformations of Vesicles Induced by Swim Pressure, Phys.Rev.Lett. 123, 14: 148003: 1-6 (2019)

K. Bielec, K. Sozansky, M. Seynen, Z. Dziekan, P.R. ten Wolde and R. Holyst, Kinetics and equilibrium constants of oligonucleotides at low concentrations. Hybridization and melting study, Phys. Chem. Chem. Phys. 21, 20: 10798-10807 (2019)

Y. Mulla, H. Wierenga, C. Alkemade, P.R. ten Wolde and G.H. Koenderink, Frustrated binding of biopolymer crosslinkers, Soft Matter 15, 14: 3036-3042 (2019)

T.R. Sokolowski, J. Paijmans, L. Bossen, T. Miedema, M. Wehrens, N.B. Becker, K. Kaizu, K. Takahashi, M. Dogterom and P.R. ten Wolde, eGFRD in all dimensions, J. Chem. Phys. 150, 5: 054108: 1-24 (2019)

J.M. Poulton, P.R. ten Wolde and T.E. Ouldridge, Nonequilibrium correlations in minimal dynamical models of polymer copying, PNAS 116, 6: 1946-1951 (2019)

T.E. Ouldridge, R.A. Brittain and P.R. ten Wolde: The power of being explicit: demystifying work, heat, and free energy in the physics of computation In: The Energetics of Computing in Life and Machines, SFI Press, 2018.