Biochemical Networks

M. Monti, D. K. Lubensky and P. R. ten Wolde, Robustness of Clocks to Input Noise, Phys. Rev. Lett. 121, (7) 078101: 1-6 (2018)

A. Vijaykumar, P. R. ten Wolde and P. G. Bolhuis, Generalised expressions for the association and dissociation rate constants of molecules with multiple binding sites, Mol. Phys. 116, 21-22: 3042-3054 (2018)

M. Monti, A theoretical study of circadian clocks and circadian metabolism, VU University Amsterdam, 2018-04-12

H. Wierenga, P. R. ten Wolde and N. Becker, Quantifying fluctuations in reversible enzymatic cycles and clocks, Phys. Rev. E 97, 042404: 1-6 (2018)

A. Vijaykumar, P. R. ten Wolde and P. G. Bolhuis, Rate constants for proteins binding to substrates with multiple binding sites using a generalized forward flux sampling expression, J. Chem. Phys. 148, 12: 124109: 1-11 (2018)

M. Monti, D. K. Lubensky and P. R. ten Wolde, Optimal entrainment of circadian clocks in the presence of noise, Phys. Rev. E 97, 3, Article number: 032405: 1-23 (2018)

J. Paijmans, Telling time while dividing, Amsterdam Sci. [3], 6 (2017)

M. Braun, Z. Lansky, A. Szuba, F. W. Schwarz, A. Mitra, M. Gao, A. Lüdecke, P. R. ten Wolde and S. Diez, Changes in microtubule overlap length regulate kinesin-14-driven microtubule sliding, Nature Chem. Biol. 13, 12: 1245-1252 (2017)

A. Vijaykumar, P. R. ten Wolde and P. G. Bolhuis, The magnitude of the intrinsic rate constant: How deep can association reactions be in the diffusion limited regime?, J. Chem. Phys. 147, 18, Article number: 184108: 1-11 (2017)

A. Vijaykumar, Multi-Scale simulation of reaction-diffusion systems, University of Amsterdam, 2017-10-24