Biochemical Networks

A.J. Tjalma, Optimal Cellular Prediction, VU University Amsterdam, 2025-06-19

M. Reinhardt, Quantifying the Flow of Information, VU University Amsterdam, 2025-06-13

J. Hurbain, P.R. ten Wolde and P.S. Swain, Quantifying the nuclear localization of fluorescently tagged proteins, Bioinform. Adv. 5, (1), vbaf114: 1-8 (2025)

D. Mulder, T.E. Ouldridge and P.R. ten Wolde, Bit reset protocols that obey activity-constrained speed limits do not minimize work for a given speed, Phys. Rev. E 111, (4), 044141: 1-15 (2025)

G. Tkačik and P.R. ten Wolde, Information Processing in Biochemical Networks, Annu. Rev. Biophys. 54, (1), 249-274 (2025)

D. Mulder, P.R. ten Wolde and T.E. Ouldridge, Exploiting bias in optimal finite-time copying protocols, Phys. Rev. Research 7, (1), L012026: 1-6 (2025)

V. Galstyan and P.R. ten Wolde, Quantifying the genetic origins of body plan scaling, PNAS 121, (1), e2422340121: 1-3 (2025)

I. Qunbar, M. Vennettilli and A. Erez, Flexibility in noisy cell-to-cell information dynamics, Phys. Rev. Research 6, (4), 043252: 1-8 (2024)

M. Majka, N.B. Becker, P.R. ten Wolde, M. Zagorski and T.R. Sokolowski, Stable developmental patterns of gene expression without morphogen gradients, PLoS Comput. Biol. 20, (12), e1012555: 1-37 (2024)

F. Xiao and V. Galstyan, With the leisure of time, kinetic proofreading can still perform reliable ligand discrimination, PNAS 121, (32), e2320118121 : 1-2 (2024)