Biochemical Networks

D. Mulder, T.E. Ouldridge and P.R. ten Wolde, Bit reset protocols that obey activity-constrained speed limits do not minimize work for a given speed, Phys. Rev. E 111, (4), 044141: 1-15 (2025)

G. Tkačik and P.R. ten Wolde, Information Processing in Biochemical Networks, Annu. Rev. Biophys. 54, (2025)

D. Mulder, P.R. ten Wolde and T.E. Ouldridge, Exploiting bias in optimal finite-time copying protocols, Phys. Rev. Research 7, (1), L012026: 1-6 (2025)

V. Galstyan and P.R. ten Wolde, Quantifying the genetic origins of body plan scaling, PNAS 121, (1), e2422340121: 1-3 (2025)

I. Qunbar, M. Vennettilli and A. Erez, Flexibility in noisy cell-to-cell information dynamics, Phys. Rev. Research 6, (4), 043252: 1-8 (2024)

M. Majka, N.B. Becker, P.R. ten Wolde, M. Zagorski and T.R. Sokolowski, Stable developmental patterns of gene expression without morphogen gradients, PLoS Comput. Biol. 20, (12), e1012555: 1-37 (2024)

F. Xiao and V. Galstyan, With the leisure of time, kinetic proofreading can still perform reliable ligand discrimination, PNAS 121, (32), e2320118121 : 1-2 (2024)

A.J. Tjalma and P.R. ten Wolde, Predicting concentration changes via discrete receptor sampling, Phys. Rev. Research 6, (3), 033049: 1-17 (2024)

R.N.U. Kok, Homeostasis in intestinal organoids at the single cell level, Delft University of Technology, 2024-04-10

M. Reinhardt, G. Tkačik and P.R. ten Wolde, Path Weight Sampling: Exact Monte Carlo Computation of the Mutual Information between Stochastic Trajectories, Phys. Rev. X 13, (4), 041017: 1-34 (2023)