Publications - Biochemical Networks

T.E. Ouldridge, C.C. Govern and P.R. ten Wolde, Thermodynamics of Computational Copying in Biochemical Systems, Phys. Rev. X 7, (2, Article number: 021004), 1-13 (2017)

A. Vijaykumar, T.E. Ouldridge, P.R. ten Wolde and P.G. Bolhuis, Multiscale simulations of anisotropic particles combining molecular dynamics and Green's function reaction dynamics, J. Chem. Phys. 146, (11, Article number: 114106), 1-12 (2017)

J. Paijmans, D.K. Lubensky and P.R. ten Wolde, A thermodynamically consistent model of the post-translational Kai circadian clock, PLoS Comput. Biol. 13, (3, Article number: e1005415), 1-43 (2017)

J. Paijmans, A computational study of the robustness of cellular oscillators, VU University Amsterdam, 2017-01-20

T. McGrath, N.S. Jones, P.R. ten Wolde and T.E. Ouldridge, Biochemical Machines for the Interconversion of Mutual Information and Work, Phys.Rev.Lett. 118, (2, Article number: 028101), 1-5 (2017)

A. Vijaykumar, P.G. Bolhuis and P.R. ten Wolde, The intrinsic rate constants in diffusion-influenced reactions, Faraday Discuss. 195, 421-441 (2016)

M. Monti and P.R. ten Wolde, The accuracy of telling time via oscillatory signals, Phys. Biol. 13, (3, SI, Article number: 035005), 1-14 (2016)

E. Roob III, N. Trendel, P.R. ten Wolde and A. Mugler, Cooperative Clustering Digitizes Biochemical Signaling and Enhances its Fidelity, Biophys. J. 110, (7), 1661-1669 (2016)

J. Paijmans, M. Bosman, P.R. ten Wolde and D.K. Lubensky, Discrete gene replication events drive coupling between the cell cycle and circadian clocks, PNAS 113, (15), 4063-4068 (2016)

P.R. ten Wolde, N.B. Becker, T.E. Ouldridge and A. Mugler, Fundamental Limits to Cellular Sensing, J. Stat. Phys. 162, (5, SI), 1395-1424 (2016)

Publications - Biochemical Networks

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