Publications - Biochemical Networks

  • R. Hermsen, S.J. Tans and P.R. ten Wolde, Transcriptional regulation by competing transcription factor modules, PLoS Comput. Biol. 2, (12, Article number: 164), 1-9 (2006)

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  • J.S. van Zon, M.J. Morelli, S. Tanase-Nicola and P.R. ten Wolde, Diffusion of transcription factors can drastically enhance the noise in gene expression, Biophys. J. 91, 4350-4367 (2006)

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  • R.J. Allen, D. Frenkel and P.R. ten Wolde, Forward flux sampling-type schemes for simulating rare events: efficiency analysis, J. Chem. Phys. 124, (Article number: 194111), 1-17 (2006)

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  • P.B. Warren, S. Tanase-Nicola and P.R. ten Wolde, Exact results for noise power spectra in linear biochemical reaction networks, J. Chem. Phys. 125, (Article number: 144904), 1-11 (2006)

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  • R.J. Allen, D. Frenkel and P.R. ten Wolde, Simulating rare events in equilibrium or nonequilibrium stochastic systems, J. Chem. Phys. 124, (Article number: 24102), 1-16 (2006)

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  • M. Howard and P.R. ten Wolde, Finding the center reliably: robust patterns of developmental gene expression, Phys.Rev.Lett. 95, (20, Article number: 208103), 1-4 (2005)

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  • J.S. van Zon and P.R. ten Wolde, Green's-function reaction dynamics: a particle-based approach for simulating biochemical networks in time and space, J. Chem. Phys. 123, (Article number: 234910), 1-16 (2005)

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  • J.S. van Zon and P.R. ten Wolde, Simulating biochemical networks at the particle level and in time and space: Green's function reaction dynamics, Phys.Rev.Lett. 94, (Article number: 128103), 1-4 (2005)

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  • D. Moroni, P.R. ten Wolde and P.G. Bolhuis, Interplay between structure and size in a critical crystal nucleus, Phys.Rev.Lett. 94, (Article number: 235703), 1-4 (2005)

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  • R.J. Allen, P.B. Warren and P.R. ten Wolde, Genen als moleculaire (sub)microprocessoren, NTvN 71, 188-191 (2005)

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