Publications - Physics of Behavior

E. C. Hammer, C. Arellano-Caicedo, P.M. Mafla-Endara, E.T. Kiers, T.S. Shimizu, Pelle Ohlsson and K. Aleklett, Hyphal exploration strategies and habitat modification of an arbuscular mycorrhizal fungus in microengineered soil chips, Fungal Ecol. 67, 101302: 1-10 (2024)

T.S. Shimizu, E.T. Kiers and H.A. Stone, Vasculature: Exploring the dynamics of vascular adaptation, eLife 12, e88052: 1-3 (2023)

M.W. Rozemuller, C. elegans behaviour and brain dynamics; a physical exploration, VU University Amsterdam, 2023-04-26

K. Kamino, N. Kadakia, F. Avgidis, Z.X. Liu, K. Aoki, T.S. Shimizu and T. Emonet, Optimal inference of molecular interaction dynamics in FRET microscopy, PNAS 120, (15), e2211807120: 1-12 (2023)

F.-Z. M. Rashid, E. Mahland, M. van der Vaart, D.E. C. Boer, M. Varela Alvarez, B. Henneman, D.J.W. Brocken, P. Voskamp, A.J. Blok, T.S. Shimizu, A.H. Meijer, M.S. Luijsterburg, J. Goedhart, F.G.E. Crémazy and R.T. Dame, HI-NESS: a family of genetically encoded DNA labels based on a bacterial nucleoid-associated protein, Nucleic Acids Res. 50, (2), e10: 1-17 (2022)

A. van't Padje, M. Klein, V.E.A. Caldas, L. Oyarte Galvez, C. Broersma, N. Hoebe, I.R. Sanders, T.S. Shimizu and E.T. Kiers, Decreasing relatedness among mycorrhizal fungi in a shared plant network increases fungal network size but not plant benefit, Ecology Letters 25, (2), 509-520 (2022)

J.J.H. Traets, Developmental timing and cell fate maintenance in Caenorhabditis elegans, VU University Amsterdam, 2021-02-10

K. Kamino, J.M. Keegstra, J. Long, T. Emonet and T.S. Shimizu, Adaptive tuning of cell sensory diversity without changes in gene expression, Sci. Adv. 6, (46), eabc1087: 1-11 (2020)

A. van't Padje, L. Oyarte Galvez, M. Klein, M.A. Hink, M. Postma, T.S. Shimizu and E.T. Kiers, Temporal tracking of quantum-dot apatite across in vitro mycorrhizal networks shows how host demand can influence fungal nutrient transfer strategies, ISME J. 15, 435-449 (2020)

S. Gude, E. Pince, K.M. Taute, A.B. Seinen, T.S. Shimizu and S.J. Tans, Bacterial coexistence driven by motility and spatial competition, Nature 578, 588-592 (2020)