Probing the structure of a rotaxane with two-dimensional infrared spectroscopy

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DOI http://dx.doi.org/10.1073/pnas.0505313102
Reference O.F.A. Larsen, P. Bodis, W.J. Buma, J.S. Hannam, D.A. Leigh and S. Woutersen, Probing the structure of a rotaxane with two-dimensional infrared spectroscopy, PNAS 102, 13378-13382 (2005)

Femtosecond 2D-IR spectroscopy has been used to study the structure of a [2]rotaxane composed of a benzylic amide macrocycle that is mechanically interlocked onto a succinamide-based thread. Both the macrocycle and the thread contain carbonyl groups, and by determining the coupling between the stretching modes of these groups from the cross-peaks in the 2D-IR spectrum, the structure of the macrocycle-thread system has been probed. Our results demonstrate that 2D-IR spectroscopy can be used to observe structural changes in molecular devices on a picosecond time scale.